miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|67830671|gb|CJ390274.1|CJ390274 GAGCGTAATGAGCGCGTCGACCTAATAAAAATAACAACAAATCATCAAAATGGATTCGACGTATCCAAGTTTAGCGAGAG
CTGGTTTGGATCAGAATTATCTACATGCTAATTCGACAACTCATGAGTTTTTATTTGGAGCACTAGCGGAATTGGTTGAT
AATGCGAGAGATGCATCTGCCACAAAAATCAATGTTTTTACTGAGAATGATGAACGTTGTAGAGGAGGCTTTACGTTGAA
TTTTTTAGATGATGGCGAAGGAATGGATGCCTCTGATGTTTCGAATATTGTTCAGTTTGGTAGATCTTCTAAACGAGCAG
TAAATGACAACATGATTGGTCAATATGGAAATGGATTAAAATCGGGGTCTATGAGAATTGGCTCTGATTTTATTCTGTTT
ACAAAACGTGGGCTAACTATGACCCGCCTGATGCTCTCGCGATCATTTTATGAACGGGAGAGAATTCAGACCATTATTGT
TCCAATGCCATCATGGGAGAGTGACACGAAGCGACCGATACTAAATGAAATTGGCGGAAAGGGTCGCTATGTTACAGAGA
TTGGTTTAATTACAAAATATTCTCCATTCAAAAGCGAAAAGGATGTAATGCGACAGTTTGATTTAATC




Most similar to sp|Q9Y6X9|MORC2_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2
           OS=Homo sapiens GN=MORC2 PE=1 SV=2
          Length = 1032

 Score =  224 bits (570), Expect = 5e-58
 Identities = 111/188 (59%), Positives = 139/188 (73%)
 Frame = +2

Query: 56  STYPSLARAGLDQNYLHANSTTHEFLFGALAELVDNARDASATKINVFTENDERCRGGFT 235
           + Y SL RA L   YLH NSTTHEFLFGALAELVDNARDA AT+I+++ E  E  RGGF 
Sbjct: 4   TNYSSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARDADATRIDIYAERREDLRGGFM 63

Query: 236 LNFLDDGEGMDASDVSNIVQFGRSSKRAVNDNMIGQYGNGLKSGSMRIGSDFILFTKRGL 415
           L FLDDG GMD SD ++++QFG+S+KR      IGQYGNGLKSGSMRIG DFILFTK+  
Sbjct: 64  LCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKED 123

Query: 416 TMTRLMLSRSFYERERIQTIIVPMPSWESDTKRPILNEIGGKGRYVTEIGLITKYSPFKS 595
           TMT L LSR+F+E E I  +IVP+P+W + T+ P+ + +    ++  E  LI KYSPF++
Sbjct: 124 TMTCLFLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNV---EKFAIETELIYKYSPFRT 180

Query: 596 EKDVMRQF 619
           E++VM QF
Sbjct: 181 EEEVMTQF 188